DEPARTMENT

Publications

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ISI-listed publications

2013
  1. Ceola S, Hödl I, Adlboller M, Singer GA, Bertuzzo E, Mari L, Botter G, Waringer J, Battin TJ & A Rinaldo. Hydrologic variability affects invertebrate grazing on phototrophic biofilms in stream microcosms. PLoS ONE 8(4): doi:10.1371/journal.pone.0060629
  2. Keckeis H (2013) Short-term effects of inshore restoration measures on early stages, benthic species, and the sublittoral fish assemblage in a large river (Danube, Austria). Hydrobiologia, doi: 10.1007/s10750-013-1485-x
  3. Lechner A, Keckeis H, Schludermann E, Humphries P, McCasker N & M Tritthart (2013) Hydraulic forces impact larval fish drift in the free flowing section of a large European river. Ecohydrology, doi: 10.1002/eco.1386
  4. Minaya V, McClain ME, Moog O, Omengo F & GA Singer. Scale-dependent effects of rural activities on benthic macroinvertebrates and physico-chemical characteristics in headwater streams of the Mara River, Kenya. Ecological Indicators 32: 116-122.
  5. Ong’ondo GO, Yasindi W, Oduor SO, Jost S, Schagerl M, Sonntag B & J Boenigk (2013). Ecology and community structure of ciliated protists in two saline-alkaline Rift Valley lakes in Kenya with special emphasis on Frontonia. J. Plankton Research, doi: 10.1093/plankt/fbt044
  6. Waringer J, Graf W, Balint M, Kucinic M, Pauls SU, Previsic A, Keresztes L & S Vitecek (2013) The larvae of Drusus franzressli Malicky 1974 and Drusus spelaeus (Ulmer 1920) (Trichoptera: Limnephilidae: Drusinae) with notes on ecology and zoogeography. Zootaxa 3637 (1): 001-016.
  7. Waringer J & W Graf (2013) Key and bibliography of the genera of European Trichoptera larvae. Zootaxa 3640 (2): 101-151.
  8. Wilhelm L, Singer GA, Fasching C, Battin TJ & K Besemer (2013) Microbial biodiversity in glacier-fed streams. The ISME Journal, doi:10.1038/ismej.2013.44
  9. Zwirn M, Chen C, Wagih Moustafa Abo El-Soud G & M Schagerl (2013) Induction of sexual reproduction in the genus Spirogyra (Zygnematophyceae, Streptophyta) and related problems. Fottea 13: 77-85
2012
  1. Akoll P, Konecny R, Mwanja WW & F Schiemer (2012) Risk Assessment of parasitic helmniths on cultured Nile Tilapia (Oreochromis niloticus, L). Aquaculture 256 (1): 123 -127.
  2. Akoll P & WW Mwanja (2012) Fish health status, research and management in East Africa: past and present. African Journal of Aquatic Sciences 37 (2): 117–129
  3. Besemer K, Peter H, Logue JB, Langenheder S, Lindström ES, Tranvik LJ & TJ Battin (2012) Unraveling assembly of stream biofilm communities. The ISME Journal 6: 1459-1468.  
  4. Bengtsson MM, Sjøtun K, Lanzén A & L Øvreås (2012) Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborean. The ISME Journal, doi:10.1038/ismej.2012.67.  
  5. Burian A, Schagerl M & A Yasindi (2012) Microzooplankton feeding behavior: Grazing on the microbial and the classical food web of African soda lakes. Hydrobiologia in press.
  6. Chen C, Barfuss M, Coleman A, Pröschold T & M Schagerl (2012) Hidden diversity of the green alga Spirogyra (Conjugatophyceae, Streptophyta). BMC Molecular Biology 12:77.
  7. Chen C & M Schagerl (2012). Slow evolution of 1506 group I intron in Spirogyra LINK 1820 (Zygnematophyceae, Streptophyta), a fast evolving lineage in the Zygnemataceae. Fottea 12: 255-272.
  8. Hall EK, Besemer K, Kohl L, Preiler C, Riedel K, Schneider T, Wanek W & TJ Battin (2012) Effects of resource chemistry on the composition and function of stream hyporheic biofilms. Frontiers in Microbiology 3: Article 35, doi: 10.3389/fmicb.2012.00035
  9. Hauer C, Keckeis H, Tritthart M, Liedermann M & H Habersack 2012. Optimierung der Habitatmodellierung an großen Fließgewässern unter Berücksichtigung von flußmorphologischen Prozessen auf unterschiedlichen Skalen. Österreichische Wasser- und Abfallwirtschaft 64: 553-563, doi: 10.1007/s00506-012-0036-4
  10. Kaggwa MN, Gruber M, Oduor SO & M Schagerl (2012) A detailed time series assessment of the diet of Lesser Flamingos - further explanation for their itinerant behaviour. Hydrobiologia in press.
  11. Ott A, Löffler J, Ahnelt H & H Keckeis (2012) Early development of the postcranial skeleton of the pikeperch Sander lucioperca (Teleostei: Percidae) relating to developmental stages and growth. Journal of Morphology published online: 14 APR 2012, DOI: 10.1002/jmor.20029.
  12. Peduzzi P, Agis M & B Luef (2012) Evaluation of confocal laser scanning microscopy for enumeration of virus-like particles in aquatic systems. Environmental Monitoring and Assessment published online: 30 OCT 2012, DOI 10.1007/s10661-012-2955-8.
  13. Ribot M, Martí E, von Schiller D, Sabater F, Daims H, Battin TJ. 2012. Nitrogen processing and the role of stream benthic biofilms downstream of a wastewater treatment plant. Freshwater Science 31(4):1057-1069
  14. Singer GA, Fasching C, Wilhelm J, Niggemann J, Steier P, Dittmar T & TJ Battin. Biogeochemically diverse organic matter in Alpine glaciers and its downstream fate. Nature Geoscience 5: 710-714, DOI: 10.1038/NGEO1581.
  15. Schludermann E, Tritthart M, Humphries P & H Keckeis (2012) Dispersal and retention of larval fish in a potential nursery habitat of a large temperate river: an experimental study. Canadian Journal of Fisheries and Aquatic Sciences 69: 1302-1315.
  16. Schmidt-Mumm U & O Vargas Rios (2012) Plant communities in the terrestrial-aquatic transition zone in the paramo of Chingaza, Colombia. Revista de Biología Tropical 60(1): 35-64. 
  17. Striebel M, Singer GA, Stibor H & T Andersen. Trophic overyielding: Phytoplankton diversity promotes zooplankton productivity. Ecology 93 (12): 2719-2727.
  18. Weilhartner A, Muellegger C, Kainz M, Mathieu F, Hofmann T & TJ Battin (2012) Gravel pit lake ecosystems reduce nitrate and phosphate concentrations in the outflowing groundwater. Science of the Total Environment 420: 222-228.
  19. Wagner-Lücke I, Lanz E, Förster M, Janauer GA & K Reiter (2012) Knowledge-based framework for delineation and classification of ephemeral plant communities in riverine landscapes to support EC Habitat Directive assessment. Ecological Informatics http://dx.doi.org/10.1016/j.ecoinf.2012.11.003
  20. Waringer J, Graf W & H Malicky (2012) The larvae of Allogamus antennatus (McLachlan 1876), Allogamus mendax (McLachlan 1876) and Allogamus pertuli Malicky 1975 (Trichoptera: Limnephilidae) with notes on ecology and zoogeography. Zootaxa 3351: 27-38.
  21. Waringer J, Graf W & H Malicky (2012). Description of the larvae of Anabolia lombarda Ris, 1897 and Limnephilus sericeus (Say, 1824), with additional notes on Limnephilus flavospinosus Stein, 1874 (Trichoptera, Limnephilidae). Aquatic Insects DOI:10.1080/01650424.2012.718084
  22. Welti N, Bondar-Kunze E, Singer GA, Tritthart, M, Zechmeister-Boltenstern S, Hein T & G Pinay (2012) Large-scale controls on potential respiration and denitrification in riverine floodplains. Ecological Engineering 42: 73-84.
  23. Woodcock S, Besemer K, Battin TJ, Curtis TP & WT Sloan (2012) Modelling the effects of dispersal mechanisms and hydrodynamic regimes upon the structure of microbial communities within fluvial biofilms. Environmental Microbiology, doi:10.1111/1462-2920.12055
2011
  1. Akoll P, Konecny R, Mwanja MW, Nattabi KJ, Agoe C & F Schiemer (2011) Parasite fauna of farmed Nile tilapia (Oreochromis niloticus) and African catfish (Clarias gariepinus) in Uganda. Parasitology Research, doi: 10.1007/s00436-011-2491-4 
  2. Akoll P, Fioravanti ML, Konecny R & F Schiemer (2011) Infection dynamics of Cichlidogyrus tilapiae and C. sclerosus (Monogenea, Ancyrocephalinae) in Nile tilapia (Oreochromis niloticus L.) from Uganda. Journal of Helminthology, doi: 10.1017/S0022149X11000411 
  3. Akoll P, Konecny R, Mwanja WW & F Schiemer (2011) Infection patterns of Nile tilapia (Oreochromis niloticus L.) by two helminth species with contrasting life styles. Parasitology Research, doi: 10.1007/s00436-011-2649-0 
  4. Borkenstein CG, Knoblechner J, Frühwirth H & M Schagerl (2011) Cultivation of Chlorella emersonii with flue gas from a cement plant. Journal of Applied Phycology 23: 131-135.
  5. Cotner, JB & EK Hall (2011) Comment on “A bacterium that can grow by using arsenic instead of phosphorus. Science 332(6034): 1149.
  6. Degefu F, Mengistu S and M Schagerl (2011) Potential Influence of Fish Cage Farming on Water Quality and Plankton in Fish Ponds: A Case Study in the Rift Valley and North Shoa Reservoirs, Ethiopia. Aquaculture, accepted.
  7. Fasching C & TJ Battin (2011) Exposure of dissolved organic matter to UV-radiation increases bacterial growth efficiency in a clear-water Alpine stream and its adjacent groundwater. Aquatic Sciences, in press.
  8. Fetahi T, Schagerl M, Mengistou S & S Libralato (2011) Food web structure and trophic interactions of the tropical highland lake Hayq, Ethiopia. Ecological Modelling 222: 804–813.
  9. Franklin O, Hall EK, Kaiser C, Richter A and TJ Battin (2011) Optimization of biomass composition explains microbial growth-stoichiometry relationships. American Naturalist 177: E29-E42.  
  10. Hödl I, Hödl J, Wörman A, Singer GA, Besemer K & TJ Battin (2011) Voronoi tessellation captures very early clustering of single primary cells as induced by interactions in nascent biofilms. PLoS ONE 6(10): e263268, doi:10.1371/journal.pone.0026368. 
  11. Kaggwa M, Liti D and M Schagerl (2011) Small tropical reservoirs and fish cage culture: a pilot study conducted in Machakos district, Kenya. Aquaculture International, accepted.
  12. Kucinic M, Previsic A, Graf W, Jelaska LS, Stanic-Kostroman S & J Waringer (2011) Larval description, genetic and ecological features of Drusus radovanovici radovanovici Marinkovic-Gospodnetic, 1971 (Trichoptera, Limnephilidae) with some phylogenetic and taxonomic data on the bosnicus group in the Balkan Peninsula. Deutsche Entomologische Zeitschrift 58 (1):135-153.
  13. Oberrisser P & J Waringer (2011) Larval salamanders and diel drift patterns of aquatic invertebrates in an Austrian stream. Freshwater Biology, 56: 1147-1159.
  14. Pröschold T, Darienko T, Silva PC, Reisser W & L Krienitz (2010) The systematics of Zoochlorella revisited employing an integrative approach. Environmental Microbiology 13(2): 350-364.
  15. Sârbu, A., Janauer, G.A., Schmidt-Mumm, U., Filzmoser, P., Smarandache, D., Pascale, G. 2011. Characterisation of the potamal Danube River and the Delta: connectivity determines indicative macrophyte assemblages. Hydrobiologia 671: 75-93.
  16. Schagerl M, Angeler DG & A Biester (2011) Phytoplankton community structure along saline and trophic gradients in urban clay-pit ponds (Vienna, Austria): unique assemblages in a human-dominated environment. Fundamental and Applied Limnology 178: 301-314.
  17. Singer G, Besemer K, Hochedlinger G, Chlup A-K &TJ Battin (2011) Monomeric carbohydrate uptake and structure-function coupling in stream biofilms. Aquatic Microbial Ecology 62: 71-83.
  18. Waringer J, Botosaneanu L & Le Guellec G (2011) The larva of Alpopsyche ucenorum (McLachlan 1876) (Trichoptera: Limnephilidae) with notes on its systematic position and ecology. Zootaxa 2967: 44-50.
  19. Waringer J, Graf W, Pitsch T, Pauls SU, Previsic A & M Kucinic (2011) Description of the larval stage of Drusus mixtus (Pictet, 1834) (Trichoptera: Limnephilidae: Drusinae) with notes on its ecology and zoogeography. Limnologica 41: 249-255.
  20. Waringer J, Graf W & H Malicky (2011) Description of the larvae of Limnephilus femoratus (Zetterstedt, 1840) and Limnephilus subnitidus McLachlan, 1875, with additional notes on Limnephilus pictoratus McLachlan, 1875 (Trichoptera: Limnephilidae). Aquatic insects 33(4): 371-380.
2010
  1. Aranguren, N., Monroy, D. & S. Gaviria (2010). Eurycercus (Bullatifrons) norandinus (Crustacea: Brachiopoda: Eurycercidae), a new species of Cladocera in the Neotropical Region. Zootaxa, 2550: 58-68.
  2. Augspurger C., Karwautz C., Mussmann M., Daims H. & T. J. Battin (2010) Drivers of bacterial colonization of stream biofilms. FEMS Microbiology Ecology 52(1): 47-57.  
  3. Bock, C., Pröschold, T. & L. Krienitz (2010) Two new Dictyosphaerium-morphotype lineages of the Chlorellaceae (Trebouxiophyceae): Heynigia gen. nov. and Hindakia gen. nov. European Journal of Phycology, in press.
  4. Caisova, L., Marin, B., Sausen, N., Pröschold, T. & M. Melkonian (2010) Polyphyly of Chaetophora and Stigeoclonium within the Chaetophorales (Chlorophyceae), revealed by sequence comparisons of nuclear-encoded SSU rRNA genes.Journal of Phycology, in press.
  5. Cotner, J.B., Hall, E.K., Scott, T., Heldal, M. (2010) Freshwater bacteria are stoichiometrically flexible with a nutrient composition similar to seston. Frontiers in Aquatic Microbiology, December 2010, Volume 1: Article 132. 
  6. Dadheech, P.K., Ballot, A., Casper, P., Kotut, K., Novelo, E., Lemma, B., Pröschold, T. & L. Krienitz (2010) Mexican Arthrospira strains show phylogenetic divergence to strains of East African and Indian origin deduced by 16S rRNA-ITS and phycocyanin operon sequences. Phycologia 49: 361-372.
  7. Darienko, T., Gustavs, L., Mudimu, O., Rad Menendez, C., Schumann, R., Karsten, U., Friedl, T. & T. Pröschold (2010) Chloroidium, a common terrestrial coccoid green alga previously assigned to Chlorella (Trebouxiophyceae, Chlorophyta). European Journal of Phycology 45: 79-95.
  8. Day, J.G., Pröschold, T., Friedl, T., Lorenz, M. & P.C. Silva (2010) Conservation of microalgal type material: approaches needed for 21st century science. Taxon 59: 3-6.
  9. Hall, E.K., Maixner, F., Franklin, O., Daims, H., Richter, A. & Battin, T. (in press) Linking microbial and ecosystem ecology using ecological stoichiometry: concepts and empiricism. Ecosytems, online first. 
  10. Hall, E.K., Singer, G.A., Kainz, M. & J. Lennon (2010) Evidence for a temperature acclimation mechanism in bacteria: an empirical test of a membrane-mediated trade-off. Functional Ecology 24: 898-908, doi: 10.1111/j.1365-2435.2010.01707.x 
  11. Hall, E.K., Singer, G.A., Pölzl, M., Hämmerle, I., Schwarz, C., Daims, H., Maixner, F. & T.J. Battin (2010) Looking inside the box: Using Raman microspectroscopy to deconstruct microbial biomass stoichiometry one cell at a time. ISME Journal 5: 196-208, doi:10.1038/ismej.2010.115 
  12. Jacquet, S., T. Miki, R. Noble, P. Peduzzi & S. Wilhelm (2010) Viruses in aquatic ecosystems: important advancements of the last 20 years and promising prospects in the field of microbial oceanography and limnology. Advances in Oceanography and Limnology 1(1): 71-101. 
  13. Janauer, G.A., Schmidt-Mumm, U., Schmidt, B. (2010) Aquatic macropyhtes and water current velocity in the Danube River. Ecological Engineering 36, 1138-1145.
  14. Keiblinger, K., Hall, E., Wanek, W., Szukics, U., Hämmerle, I., Ellersdorfer, G., Böck, S., Strauss, J., Sterflinger, K., Richter, A., Zechmeister-Boltenstern, S. (2010) The Effect of Resource Quantity and Resource Stoichiometry on Microbial Carbon Use Efficiency. FEMS Microbiology Ecology 73: 430-440.  
  15. Krienitz, L., Bock, C., Dadheech, P.K. & T. Pröschold (2010) The Mychonastes-clade of Chlorophyceae and the dispute on conception of orders in green algae. Phycologia, in press.
  16. Krienitz, L., Bock, C., Luo, W. & T. Pröschold (2010) Polyphyletic origin of the Dictyosphaerium-morphotype within Chlorellaceae (Trebouxiophyceae).Journal of Phycology 46: 559-563.
  17. Lumjiaktase, P., Aguilar, C., Battin, T., Riedel, K. & L. Eberl (2010). Construction of self-transmissible GFP-based biosensor plasmids and their use for the identification of N-acyl homoserine-producing bacteria in lake sediment. Applied and Environmental Microbiology 76(18): 6119-6127, doi:10.1128/AEM.00677-10.  
  18. Luo, W., Pröschold, T., Bock, C. & L. Krienitz (2010) Generic concept in Chlorella-related coccoid green algae (Chlorophyta, Trebouxiophyceae). Plant Biology 12 (2010): 545-553.
  19. Philippot, L., Andersson, S.G.E., Battin, T.J., Prosser, J.I., Schimel, J.P., Whitman, W.B. & S. Hallin (2010) The ecological coherence of high bacterial taxonomic ranks. Nature Reviews Microbiology 8: 523-529, doi:10.1038/nrmicro2367 
  20. Pokorny, N., Fesl, C., Schagerl, M. & J. Waringer (2010). Factors structuring macroinvertebrate communities in a headwater stream and its springs in the Upper Austrian limestone Alps. River Research and Applications, doi: 10.1002/rra.1474.
  21. Pröschold, T., Bock, C., Luo, W. & L. Krienitz (2010) Polyphyletic origin of bristle formation in Chlorellaceae: Micractinium, Didymogenes and Hegewaldia gen. nov. (Trebouxiophyceae, Chlorophyta). Phycological Research 58: 1-8.
  22. Schagerl, M., Bloch, I., Angeler, D.G. & C. Fesl (2010) The use of urban clay-pit ponds for human recreation: assessment of impacts on water quality and phytoplankton assemblages. Environmental Monitoring and Assessment 165: 283-293.  
  23. Schneider, T., Gerrits, B., Gassmann, R., Schmid, E., Gessner, M.O., Richter, A., Battin, T.J., Eberl, L. & K. Riedel (2010). Proteomics 10: 1819-1830, doi: 10.1002/pmic.200900691. 
  24. Singer, G.A., Besemer, K., Schmitt-Kopplin, P., Hödl, I.-A. & T.J. Battin (2010) Physical Heterogeneity Increases Biofilm Resource Use and Its Molecular Diversity in Stream Mesocosms. PLoS ONE 5(4): e9988. doi:10.1371/journal.pone.0009988. 
  25. Waringer, J., Graf, W., Pitsch T., Pauls S.U., Previšić A. & M. Kučinić (2010). Description of the larval stage of Drusus mixtus (Pictet, 1834) (Trichoptera: Limnephilidae: Drusinae) with notes on its ecology and zoogeography. Limnologica, doi:10.1016/j.limno.2010.10.006.
2009
  1. Battin, T. J., Kammer, F. v. d., Weilhartner, A., Ottofuelling, S. & Hofmann, T. (2009) Nanostructured TiO2: Transport behavior and effects on aquatic microbial communities under environmental conditions.Environmental Science and Technology, 43, 8098–8104. 
  2. Battin, T. J., Luyssaert, S., Kaplan, L. A.,. Aufdenkampe, A. K, Richter, A. & Tranvik, L. J. (2009) The boundless carbon cycle. Nature Geoscience, 2, 598-600. 
  3. Besemer, K., Hödl, I., Singer, G. & Battin, T. J. (2009) Architectural differentiation reflects bacterial community structure in stream biofilms. The ISME Journal, 3, 1318–1324. 
  4. Besemer, K., Luef, B., Preiner, S., Eichberger, B., Agis, M. & Peduzzi, P. (2009) Sources and composition of organic matter for bacterial growth in a large European river-floodplain system (Danube, Austria). Organic Geochemistry, 40, 321-331. 
  5. Besemer, K., Singer, G., Hödl, I. & Battin, T. J. (2009) Bacterial community composition of stream biofilms in spatially variable-flow environments. Applied and Environmental Microbiology, 75, 7189–7195. 
  6. Bottacin – Busolin, A., Singer, G., Zaramella, M., Battin, T. J. & Marion, A. (2009) Effects of streambed morphology and biofilm growth on the transient storage of solutes. Environmental Science and Technology, 43, 7337–7342. 
  7. Graf, W., Waringer, J. & Pauls, S.U. (2009) A new feeding group within larval Drusinae (Trichoptera: Limnephilidae): the Drusus alpinus group sensu Schmid, 1956, including larval descriptions of Drusus franzi Schmid, 1956, and Drusus alpinus (Meyer-Dür, 1875). Zootaxa, 2031, 53–62. 
  8. Hainz, R., Wöber, C. & Schagerl, M. (2009) The relationship between Spirogyra (Zygnematophyceae, Streptophyta) filament type groups and environmental conditions in Central Europe. Aquatic Botany, 91, 173-180. 
  9. Hall, E. K., Dzialowski, A. R., Stoxen, S. M. & Cotner J. B. (2009) The effect of temperature on the coupling between phosphorus and growth in lacustrine bacterioplankton communities. Limnology and Oceanography, 54, 880-889. 
  10. Kernegger, L., Zweimüller, I. & Peduzzi, P. (2009) Effects of suspended matter quality and virus abundance on microbial parameters: experimental evidence from a large European river. Aquatic Microbial Ecology, 57, 161-173. 
  11. Luef, B., Luef, F. & Peduzzi, P. (2009) Online program ‘VIPCAL’ for calculating lytic viral production and lysogenic cells based on a viral reduction approach. Environmental Microbiology Reports, 1, 78-85. 
  12. Luef, B., Neu, T.R. & Peduzzi, P. (2009) Imaging and quantifying virus fluorescence signals on aquatic aggregates: a new method and its implication for aquatic microbial ecology. FEMS Microbiology Ecology, 68, 372-380. 
  13. Luef, B., Neu, T.R., Zweimüller, I. & Peduzzi, P. (2009) Structure and composition of aggregates in two large European rivers based on confocal laser scanning microscopy, image and statistical analysis. Applied Environmental Microbiology, 75, 5952-5962. 
  14. Rakowitz, G., Kubečka, J., Fesl, C. & Keckeis, H. (2009) Intercalibration of hydroacoustic and mark–recapture methods for assessing the spawning population size of a threatened fish species. Journal of Fish Biology, 75, 1356–1370. 
  15. Schagerl, M., & Kerschbaumer M. (2009) Autecology of selected Vaucheria species (Xanthophyceae). Aquatic Ecology, 43, 295-303.  
  16. Schagerl, M., Bloch, I., Angeler, D.G. & Fesl, C. (2009) The use of urban clay-pit ponds for human recreation: assessment of impacts on water quality and phytoplankton assemblages. Environmental Monitoring and Assessment, 1573-2959. 
  17. Schagerl, M., Drozdowski, I., Angeler, D.G., Hein, T. & Preiner, S. (2009) Water age – A major factor controlling phytoplankton community structure in a reconnected dynamic floodplain (Danube, Regelsbrunn, Austria). Journal of Limnology, 68, 274-287. 
  18. Schagerl, M., Hainz, R. & Wöber, C. (2009) Autecology and species delineations of the green filamentous alga Spyrogyra LINK. Phycologia, 48, 115.
  19. Schludermann, E., Keckeis, H. & Nemeschkal, H.-L. (2009) Effect of initial size on daily growth and survival in freshwater Chondrostoma nasus larvae: a field survey. Journal of Fish Biology, 74, 939–955. 
  20. Waringer, J. & Graf, W. (2009) The larva of Diplectrona magna Mosely, 1930 (Trichoptera: Hydropsychidae). Aquatic Insects, 31, 19–24. 
  21. Weinbauer, M.G., Bettarel, I., Cattaneo, R., Luef, B., Maier, C., Motegi, C., Peduzzi, P. & Mari, X. (2009) Viral ecology of organic and inorganic particles in aquatic systems: avenues for further research. Aquatic Microbial Ecology, 57, 321-341. 

Non-ISI publications

2012
2011
  1. Graf W, Kucinic M, Previsic A, Pauls SU & J Waringer (2011). The larva of Ecclisopteryx malickyi Moretti, 1991 (Trichoptera: Limnephilidae: Drusinae), with comments on the genus. Zoosymposia 5: 136-142.
  2. Janauer GA, Schmidt-Mumm U, Reckendorfer W (in press). Ecohydraulics and aquatic macrophytes: assessing the relationship in river floodplains. In: Maddock, I., Harby, A., Kemp, P., Wood, P. (Eds.). Ecohydraulics: An Integrated Approach. John Wiley and Sons, UK.
  3. Kucinic M, Previsic A, Stanic-Kostroman S, Graf W, Franjevic M, Posilovic H & J Waringer (2011). Morphological and ecological features of Drusus larvae from the D. bosnicus Group on the Balkan Peninsula with description of the larva of Drusus klapaleki Marinkovic-Gospodnetic, 1971. Zoosymposia 5: 244-254.
  4. Lang S, Kääb A, Pechstädt J, Flügel W-A, Zeil P, Lanz E, Kahuda D, Frauenfelder R, Casey K, Füreder P, Sossna I, Wagner I, Janauer G, Exler N, Boukalova Z, Tapa R, Lui J & N Sharma (2011) Assessing components of the natural environment of the Upper Danube and Upper Brahmaputra river basins. Advances in Science and Research 7: 21–36, doi:10.5194/asr-7-21-2011. 
  5. Scheckenhofer B, Waringer-Löschenkohl A & J Waringer (2011) Laichphänologie und Embryolarvalentwicklung der Erdkröte, Bufo bufo (Linnaeus, 1758) in stehenden und fließenden Gewässern. Herpetozoa 23: 45-58. 
2010
  1. Barta, V., Janauer, G.A., Teubner, K. (2010) Spatial patchiness and similarity of macrophyte assemblages along a cut-off channel of the River Danube in Linz (Austria). Bundesamt für Gewässerkunde, Koblenz. 7 pp.
  2. Braun, B. & M. Schagerl (2010) Algal communities of an impoundment along the river Große Erlauf (Austria) related to their environment. River Systems 19: 3-13. 
  3. Exler, N., Janauer, G.A. (2010). A hydro-acoustics approach of accessing macrophyte biomass data. Acta Biologica Slovenica 53(2): 45-51.  
  4. Fischer, M. & J. Waringer (2010): Geologie des Wienerwalds: Flysch und Kalk. In: Friedrich Ehrendorfer, Roland Berger (Hrsg.): Ökosystem Stadt: Die Naturgeschichte Wiens, 258260. Böhlau Verlag.
  5. Graf, W., Kucinic, M., Previcic, A., Pauls, S.U. & J. Waringer (2010). The larva of Ecclisopteryx malickyi Moretti, 1991(Trichoptera: Limnephilidae; Drusinae) with comments on the genus. Zoosymposia, in print.
  6. Graf, W., Pauls, S. & J. Waringer (2010). Challenging conventional genus concepts: the larva of Ecclisopteryx malickyi Moretti, 1991 (Trichoptera: Limnephilidae: Drusinae). Lauterbornia 71: 185-187.
  7. Janauer, G. A. (2010). MIDCC turns practical: river rehabilitation, flow impact, Floodplain Index and FFH – habitat types, WFD ‘ecological potential’, CEN standards and inter-laboratory comparison, and an affirmation of the Kohler methodology. Institute of Biology, University of Ljubljana. Book of Abstracts. p.8
  8. Janauer, G.A., Haury, J., Englmaier, P. (2010). Klein aber fein: Städtische Kleingewässer und ihre Vegetation. In: Ehrendorfer, F. &, Berger, R. (Hg.) Ökosystem Wien. Die Naturgeschichte einer Stadt, pp.133-135, Böhlau, Wien.
  9. Janauer, G.A., Schmidt-Mumm, U. , Reckendorfer, W. (2010) The macrophyte – floodplain habitat relationship: indicator species, diversity and dominance. Bundesamt für Gewässerkunde, Koblenz. 5pp.
  10. Janauer, G.A. (in press). Aquatic vegetation in river floodplains: Climate change effects, river restoration and ecohydrology aspects. Berichte der Serbischen Akademie der Wissenschaften, Belgrad. 19pp.
  11. Kucinic, M., Previcic, A., Stanic-Kostroman, S., Graf, W., Franjevic, M., Posilovic, H. & J. Waringer (2010). Morphological and ecological features of Drusus larvae from the bosnicus group on the Balkan Peninsula with description of the larva of Drusus klapaleki Marinkovic-Gospodnetic 1976. Zoosymposia, (in print).
  12. Lang, S., Kääb, A., Pechstädt, J., Flügel, W.-A., Zeil, P., Lanz, E., Kahuda, D., Frauenfelder, R., Casey, K., Füreder, P., Sossna, I., Wagner, I., Janauer, G.A., Exler, N., Boulakova, Z., Tapa, R., Liu, J., Sharma, N. (in press). Assessing component of the Natural Environment of Upper Danube and Upper Brahmaputra River Basins. Copernicus Publisher.
  13. Lanz, E., Janauer, G., Exler, N. (2010). Concrete measures for adapting to Climate Change needed. Aqua press 4: 28-30.
  14. Lanz, E., Wagner, I., Schabuss, M., Reiter, K., Janauer, G.A. (in press) The aquatic macrophyte vegetation and controversial goals oft he EX Habitat- and Water Framework Directve (Poster-Abstract). ICLE, Brno.
  15. Niedermayr R & M Schagerl (2010) Structuring factors of the phytobenthos community along a mountain headwater (Kalkalpen National Park, Austria). Fundamental and Applied Limnology 177(2): 93-104.  
  16. Okorn, G., Metscher, B., Draxler, G., Janauer, G.A. (in press). Value-adding application of micro-CT to highly rigid plant tissues: Phragmites australis (Cav.) Trin. ex. Steud. knot sections. Berichte der Zoologisch-Botanischen Gesellschaft in Österreich.
  17. Ozimec, S., Topić, J., Janauer, G. (2010) Inventory of Macrophytes and Habitats along the River Danube in Croatia. Bundesamt für Gewässerkunde, Koblenz. 5pp.
  18. Waringer-Löschenkohl, A., Ruzek, S. & F. Werba (2010). Amphibien im Nationalpark Thayatal. Wissenschaftliche Mitteilungen des Niederösterreichischen Landesmuseums 21: 361-384.
  19. Waringer, J. (2010) Wienerwaldbäche und Wienfluss. In: Friedrich Ehrendorfer, Roland Berger (Hrsg.): Ökosystem Stadt: Die Naturgeschichte Wiens, 305-313. Böhlau Verlag.
  20. Waringer, J. (2010): Morphological adaptations to water flow of benthic stream organisms. In: F. Schiemer, W. Huber & A. Weissenhofer (Eds): Stream Ecosystems of Costa Rica, 40-41. Verein zur Förderung der Tropenstation La Gamba, Vienna, Austria.
  21. Waringer, J. (2010). Order Trichoptera. In: F. Schiemer, W. Huber & A. Weissenhofer (Eds): Stream Ecosystems of Costa Rica, 46-48. Verein zur Förderung der Tropenstation La Gamba, Vienna, Austria.
  22. Waringer, J., Graf, W., Kucinic, M., Previsic, A. & I. Vuckovic (2010). The larva of Annitella apfelbecki (Klapálek, 1899) (Trichoptera: Limnephilidae). Zoosymposia, in print.
  23. Waringer, J., Graf, W., Pauls, S.U., Previsic, A. & M. Kucinic (2010) A larval key to the Drusinae species (Trichoptera: Limnephilinae) of Austria, Germany, Switzerland and the dinaric western Balkan. Denisia 29:000-000.
  24. Wöss, E.R. & K. Zagorsek (2010) First records of freshwater Bryozoa (Phylactolaemata) from Kalimantan, island of Borneo, Indonesia. Journal of the National Museum (Prague), Natural History Series 179(21): 217-222.
2009
  1. Ciais, P, H Dolman, R Dargaville, L Barrie, TJ Battin, A Bombelli, A Borges, H Boversmann, F-M Bréon, M Bushwitz, J Butler, P Canadell, R Cook, N Gobron, C Heinze, M Heimann, A Held, M Henry, E Kasischke, B Law, S Luyssaert, G Marland, J Miller, T Moriyama, R Munro, D Ojima, Y Pan, S Plummer, S Quegan, P Rayner, C Sabine, D Schimel, O Tarasova, R Valentini, A Watson, G van der Werf, C Zehner (2009) GEO Carbon Strategy. Group on Earth Observations.
  2. Janauer, G.A., Schmidt, B., Lanz, E., Schmidt-Mumm, U. (2009) Aquatic macrophytes in a Large River: ecological status, trophic level indication, habitat preference and species migration in the Danube. 12th EWRS International Symposium on Aquatic Weeds, Jyväskylä, Finland, August 24 - 28, 2009. Proceedings. (in press). 
  3. Niedermayr, R., Pokorny, N. & Schagerl, M. (2009) Die Phytobenthosgemeinschaft eines Quellbaches im Nationalpark Kalkalpen, Österreich. Beiträge zur Naturkunde Oberösterreichs, 19, 269-294.
  4. Peduzzi, P. & Luef, B. (2009) Viruses. In: G.E. Likens (ed.): Encyclopedia of Inland Waters, 3, 279-294. 
  5. Rakowitz, G. (2009) DIDSON counting - Manual or Automatic? In Proceedings of the 3rd International Conference and Exhibition on Underwater Acoustic Measurements: Technologies and Results, 3rd UAM (Papadakis J. & Björnö L. Eds), IACM, Nafplion, Greece, 2, 1045-1050. 
  6. Strausz, V., Schmidt-Mumm, U., Janauer, G.A. (2009) Adapting floodplain connectivity conditions – a prerequisite for sustaining aquatic macrophyte diversity in the UNESCO Biosphere Reserve Lobau (Austria). Ecohydrology Hydrobiology 9.
  7. Exler, N., Wagner, I., Janauer, G. A. (2009). Biodiversity and Remote Sensing in Relation to Diverging Scales in the BRAHMATWINN Project. In: Hartmann, M. , J. Weipert (Eds). Biodiversität & Naturausstattung im Himalaya Vol. III, 25-30.
  8. Janauer, G.A. 2009. How do different growth forms of aquatic plants influence the oxygen concentration within a water body? In: Chicharo, L., Wagner, I., Chicharo, M., Lapinska, M., Zalewski, M. (Eds.). Practical experiments guide for ecohydrology UNESCO Regional Bureau for Science and Culture in Europe (BRESCE), Italy, and University of Algarve, International Centre for Coastal Ecohydrology, Faro, Portugal. p. 59-62.