Molecular Systems Biology

SOFTWARE

 

 

FEMTO

Functional Interpretation of Metabolomic Time Series Data in Context of Metabolic Network Information.

Publication:

Functional Interpretation of Metabolomic Time Series Data

Download FEMTO... download FEMTO (Zip-File)

Getting Started
1. Download the ZIP-File.
2. Uncompress the downloaded file into a directory.
3. Start Matlab, go into the directory of FEMTO
4. command "FEMTO"

If you have questions or want to report a bug, please contact us.

COVAIN

A toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data.

Publication:

COVAIN: A toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data.
Xiaoliang Sun and Wolfram Weckwerth
Metabolomics. Volume 8, 2012
.

Download COVAIN... download COVAIN (Zip-File)

Getting Started
1. Download the ZIP-File.
2. Uncompress the downloaded file into a directory.
3. Start Matlab, go into the directory of COVAIN
4. command "COVAIN"

If you have questions or want to report a bug, please contact us.

ProtMAX

ProtMAX is a fast and robust software tool for analyzing large shotgun proteomics mass spectrometry data sets.

... download ProtMAX

Getting Started
1. Download ProtMAX. See above.
2. Uncompress the downloaded file into a directory.
3. Start Installation via 'setup.exe'

Test ProtMAX
...download testdata

If you have questions or want to report a bug, please contact us: volker.egelhofer@univie.ac.at or stefanie.wienkoop@univie.ac.at